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  The AnimalAssociatedMetagenomeDB reveals a bias towards livestock and developed countries and blind spots in functional-potential studies of animal-associated microbiomes

Avila Santos, A. P., Kabiru Nata’ala, M., Kasmanas, J. C., Bartholomäus, A., Keller-Costa, T., Jurburg, S. D., Tal, T., Camarinha-Silva, A., Saraiva, J. P., Ponce de Leon Ferreira de Carvalho, A. C., Stadler, P. F., Sipoli Sanches, D., Rocha, U. (2023): The AnimalAssociatedMetagenomeDB reveals a bias towards livestock and developed countries and blind spots in functional-potential studies of animal-associated microbiomes. - Animal Microbiome, 5, 48.
https://doi.org/10.1186/s42523-023-00267-3

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 ???ViewItemFull_lblCreators???:
Avila Santos, Anderson Paulo1, ???ENUM_CREATORROLE_AUTHOR???
Kabiru Nata’ala, Muhammad1, ???ENUM_CREATORROLE_AUTHOR???
Kasmanas, Jonas Coelho1, ???ENUM_CREATORROLE_AUTHOR???
Bartholomäus, Alexander2, ???ENUM_CREATORROLE_AUTHOR???                 
Keller-Costa, Tina1, ???ENUM_CREATORROLE_AUTHOR???
Jurburg, Stephanie D.1, ???ENUM_CREATORROLE_AUTHOR???
Tal, Tamara1, ???ENUM_CREATORROLE_AUTHOR???
Camarinha-Silva, Amélia1, ???ENUM_CREATORROLE_AUTHOR???
Saraiva, João Pedro1, ???ENUM_CREATORROLE_AUTHOR???
Ponce de Leon Ferreira de Carvalho, André Carlos1, ???ENUM_CREATORROLE_AUTHOR???
Stadler, Peter F.1, ???ENUM_CREATORROLE_AUTHOR???
Sipoli Sanches, Danilo1, ???ENUM_CREATORROLE_AUTHOR???
Rocha, Ulisses1, ???ENUM_CREATORROLE_AUTHOR???
???ViewItemFull_lblAffiliations???:
1External Organizations, ou_persistent22              
23.7 Geomicrobiology, 3.0 Geochemistry, Departments, GFZ Publication Database, Deutsches GeoForschungsZentrum, ou_146043              

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 ???ViewItemFull_lblAbstract???: Metagenomic data can shed light on animal-microbiome relationships and the functional potential of these communities. Over the past years, the generation of metagenomics data has increased exponentially, and so has the availability and reusability of data present in public repositories. However, identifying which datasets and associated metadata are available is not straightforward. We created the Animal-Associated Metagenome Metadata Database (AnimalAssociatedMetagenomeDB - AAMDB) to facilitate the identification and reuse of publicly available non-human, animal-associated metagenomic data, and metadata. Further, we used the AAMDB to (i) annotate common and scientific names of the species; (ii) determine the fraction of vertebrates and invertebrates; (iii) study their biogeography; and (iv) specify whether the animals were wild, pets, livestock or used for medical research.

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???ViewItemFull_lblLanguages???: eng - English
 ???ViewItemFull_lblDates???: 2023-10-052023
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 ???ViewItemFull_lblIdentifiers???: ???ENUM_IDENTIFIERTYPE_DOI???: 10.1186/s42523-023-00267-3
???ENUM_IDENTIFIERTYPE_GFZPOF???: p4 T5 Future Landscapes
???ENUM_IDENTIFIERTYPE_OATYPE???: Gold Open Access
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???ViewItemFull_lblSourceTitle???: Animal Microbiome
???ViewItemFull_lblSourceGenre???: ???ENUM_GENRE_JOURNAL???, Scopus, oa, Emerging Sources Citation Index
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???ENUM_IDENTIFIERTYPE_PUBLISHER???: Springer Nature